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Obtain a decoupleR reference

Usage

get_decoupleR_reference(
  method = "progeny",
  organism = "human",
  n_genes = 500,
  confidence = NULL,
  ...
)

Arguments

method

method to use, progeny, dorothea or collectri

organism

which organism

n_genes

number genes to return, for progeny

confidence

condfidence level for transcription factor reference, vector of levels to include, for dorothea

...

additional parameters to pass to the methods